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1

LeishDB: a database of coding gene annotation and non-coding RNAs in Leishmania braziliensis

Torres, Felipe, Arias-Carrasco, Raúl, Caris-Maldonado, José C., Barral, Aldina, Maracaja-Coutinho, Vinicius, De Queiroz, Artur T. L.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.08 MB

english, 2017

2

Deep Sequencing Reveals the Complete Genome and Evidence for Transcriptional Activity of the First Virus-Like Sequences Identified in Aristotelia chilensis (Maqui Berry)

Villacreses, Javier, Rojas-Herrera, Marcelo, Sánchez, Carolina, Hewstone, Nicole, Undurraga, Soledad, Alzate, Juan, Manque, Patricio, Maracaja-Coutinho, Vinicius, Polanco, Victor

Journal:

Year:

2015

Language:

english

File:

PDF, 1.94 MB

english, 2015

3

A Novel Method to Predict Genomic Islands Based on Mean Shift Clustering Algorithm

de Brito, Daniel M., Maracaja-Coutinho, Vinicius, de Farias, Savio T., Batista, Leonardo V., do Rêgo, Thaís G., Arnold, Dawn L

Journal:

Year:

2016

Language:

english

File:

PDF, 894 KB

english, 2016

4

Non-coding transcription characterization and annotation

Paschoal, Alexandre Rossi, Maracaja-Coutinho, Vinicius, Setubal, João Carlos, Simões, Zilá Luz Paulino, Verjovski-Almeida, Sergio, Durham, Alan Mitchell

Journal:

Year:

2012

Language:

english

File:

PDF, 2.08 MB

english, 2012

5

Editorial: User-Friendly Tools Applied to Genetics or Systems Biology

Nakaya, Helder I., Thakar, Juilee, Maracaja-Coutinho, Vinicius

Journal:

Frontiers in Genetics

Year:

2020

File:

PDF, 101 KB

2020

6

Non-coding RNAs in schistosomes: an unexplored world

Oliveira, Katia C, Carvalho, Mariana L. P, Maracaja-Coutinho, Vinicius, Kitajima, João P, Verjovski-Almeida, Sergio

Journal:

Anais da Academia Brasileira de Ciências

Year:

2011

Language:

english

File:

PDF, 3.40 MB

english, 2011

7

StructRNAfinder: an automated pipeline and web server for RNA families prediction

Arias-Carrasco, Raúl, Vásquez-Morán, Yessenia, Nakaya, Helder I., Maracaja-Coutinho, Vinicius

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.24 MB

english, 2018

8

Long noncoding RNAs are involved in multiple immunological pathways in response to vaccination

de Lima, Diógenes S., Cardozo, Lucas E., Maracaja-Coutinho, Vinicius, Suhrbier, Andreas, Mane, Karim, Jeffries, David, Silveira, Eduardo L. V., Amaral, Paulo P., Rappuoli, Rino, de Silva, Thushan I.,

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.14 MB

english, 2019

9

Complete Genome Sequence of Salmonella enterica Serovar Enteritidis Bacteriophage f18SE, Isolated in Chile

Segovia, Cristopher, Vasquez, Ignacio, Maracaja-Coutinho, Vinicius, Robeson, James, Santander, Javier

Journal:

Genome Announcements

Year:

2015

Language:

english

File:

PDF, 155 KB

english, 2015

10

Expression analysis and in silico characterization of intronic long noncoding RNAs in renal cell carcinoma: emerging functional associations

Fachel, Angela A, Tahira, Ana C, Vilella-Arias, Santiago A, Maracaja-Coutinho, Vinicius, Gimba, Etel RP, Vignal, Giselle M, Campos, Franz S, Reis, Eduardo M, Verjovski-Almeida, Sergio

Journal:

Molecular Cancer

Year:

2013

Language:

english

File:

PDF, 1.58 MB

english, 2013

11

Core non-coding RNAs of Piscirickettsia salmonis

Segovia, Cristopher, Arias-Carrasco, Raul, Yañez, Alejandro J., Maracaja-Coutinho, Vinicius, Santander, Javier, Rogozin, Igor B.

Journal:

Year:

2018

Language:

english

File:

PDF, 4.24 MB

english, 2018

12

CORAZON: a web server for data normalization and unsupervised clustering based on expression profiles

Ramos, ThaÃs A. R., Maracaja-Coutinho, Vinicius, Ortega, J. Miguel, do RÃªgo, ThaÃs G.

Journal:

BMC Research Notes

Year:

2020

File:

PDF, 1.68 MB

2020

13

A regulatory RNA is involved in RNA duplex formation and biofilm regulation in Sulfolobus acidocaldarius

Orell, Alvaro, Tripp, Vanessa, Aliaga-Tobar, Victor, Albers, Sonja-Verena, Maracaja-Coutinho, Vinicius, Randau, Lennart

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 5.87 MB

english, 2018

14

Schizophrenia, brain disease and meta-analyses: Integrating the pieces and testing Fusar-Poli’s hypothesis

Álvaro Machado Dias, Artur Trancoso Lopo Queiroz, Vinícius Maracaja-Coutinho

Journal:

Medical Hypotheses

Year:

2010

Language:

english

File:

PDF, 108 KB

english, 2010

15

The Role of Neuregulin 1 in Schizophrenia: A Bioinformatics Approach

Dias, Alvaro, Maracaja-Coutinho, Vinicius, Lopo, Artur

Journal:

Nature Precedings

Year:

2009

Language:

english

File:

PDF, 589 KB

english, 2009

16

Genome-wide circulating microRNA expression profiling reveals potential biomarkers for amyotrophic lateral sclerosis

Matamala, José Manuel, Arias-Carrasco, Raul, Sanchez, Carolina, Uhrig, Markus, Bargsted, Leslie, Matus, Soledad, Maracaja-Coutinho, Vinicius, Abarzua, Sebastian, van Zundert, Brigitte, Verdugo, Renato

Journal:

Neurobiology of Aging

Year:

2017

Language:

english

File:

PDF, 6.84 MB

english, 2017

17

A Guide to Scientific Crowdfunding

Vachelard, Julien, Gambarra-Soares, Thaise, Augustini, Gabriela, Riul, Pablo, Maracaja-Coutinho, Vinicius

Journal:

Year:

2016

Language:

english

File:

PDF, 274 KB

english, 2016

18

Prediction of MicroRNAs in the Epstein–Barr Virus Reveals Potential Targets for the Viral Self-Regulation

Serrano-Solis, Victor, Carlos, Angelica Cardoso, Maracaja-Coutinho, Vinicius, de Farias, Sávio Torres

Journal:

Indian Journal of Microbiology

Year:

2018

Language:

english

File:

PDF, 923 KB

english, 2018

19

webCEMiTool: Co-expression Modular Analysis Made Easy

Cardozo, Lucas E., Russo, Pedro S. T., Gomes-Correia, Bruno, Araujo-Pereira, Mariana, Sepúlveda-Hermosilla, Gonzalo, Maracaja-Coutinho, Vinicius, Nakaya, Helder I.

Journal:

Frontiers in Genetics

Year:

2019

Language:

english

File:

PDF, 871 KB

english, 2019

20

The Role of Neuregulin 1 in Schizophrenia: A Bioinformatics Approach

Dias, Alvaro, Maracaja-Coutinho, Vinicius, Lopo, Artur

Journal:

Nature Precedings

Year:

2009

File:

PDF, 589 KB

2009

21

Assessing the Impact of Sample Heterogeneity on Transcriptome Analysis of Human Diseases Using MDP Webtool

Gonçalves, André N. A., Lever, Melissa, Russo, Pedro S. T., Gomes-Correia, Bruno, Urbanski, Alysson H., Pollara, Gabriele, Noursadeghi, Mahdad, Maracaja-Coutinho, Vinicius, Nakaya, Helder I.

Journal:

Frontiers in Genetics

Year:

2019

Language:

english

File:

PDF, 1.84 MB

english, 2019

22

Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer

Ana C Tahira, Márcia S Kubrusly, Michele F Faria, Bianca Dazzani, Rogério S Fonseca, Vinicius Maracaja-Coutinho, Sergio Verjovski-Almeida, Marcel CC Machado, Eduardo M Reis

Journal:

Molecular Cancer

Year:

2011

Language:

english

File:

PDF, 1011 KB

english, 2011

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